STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
UMAG_01851Uncharacterized protein. (232 aa)    
Predicted Functional Partners:
UMAG_05327
Chromosome 19, whole genome shotgun sequence.
    
 0.536
UMAG_04555
Myosin V; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.486
UMAG_00113
Chromosome 1, whole genome shotgun sequence.
  
 
 0.456
UMAG_10616
Putative spindle pole body component, centrin.
    
 0.438
UMAG_01221
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
   
  0.435
UMAG_01651
Putative Rab family GTPase YPT31.
    
 0.408
JHD1
JmjC domain-containing histone demethylation protein 1; Histone demethylase that specifically demethylates 'Lys-36' of histone H3, thereby playing a central role in histone code.
   
 0.404
Your Current Organism:
Ustilago maydis
NCBI taxonomy Id: 237631
Other names: U. maydis 521, Ustilago maydis 521
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