STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
UMAG_00009Translation machinery-associated protein 20; Involved in translation; Belongs to the TMA20 family. (197 aa)    
Predicted Functional Partners:
UMAG_10363
Chromosome 7, whole genome shotgun sequence.
   
 
 0.990
UMAG_05434
Chromosome 19, whole genome shotgun sequence.
   
   0.680
UMAG_03680
Chromosome 10, whole genome shotgun sequence.
    
   0.663
UMAG_04501
Uncharacterized protein.
   
 
 0.613
UMAG_02665
Putative translation initiation factor eIF1.
   
 
 0.613
UMAG_06117
Obg-like ATPase 1; Hydrolyzes ATP, and can also hydrolyze GTP with lower efficiency. Has lower affinity for GTP.
 
 
    0.577
UMAG_02439
Uncharacterized protein.
    
   0.542
UMAG_03237
Chromosome 8, whole genome shotgun sequence.
   
   0.488
UMAG_01144
POP4 domain-containing protein.
   
  
 0.488
UMAG_06224
Putative GTPase/general translation initiation factor eIF2.
      
 0.472
Your Current Organism:
Ustilago maydis
NCBI taxonomy Id: 237631
Other names: U. maydis 521, Ustilago maydis 521
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