STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMAG_05939CMP/dCMP-type deaminase domain-containing protein. (224 aa)    
Predicted Functional Partners:
UMAG_00758
Chromosome 1, whole genome shotgun sequence.
   
 0.796
UMAG_15027
Chromosome 21, whole genome shotgun sequence.
   
 
 0.642
UMAG_10783
Putative glyoxylase I.
   
 
 0.545
UMAG_05916
VPS9 domain-containing protein.
  
 
 0.519
UMAG_02407
Thymidylat_synt domain-containing protein.
  
 
 0.499
UMAG_03839
Chromosome 10, whole genome shotgun sequence.
  
    0.440
UMAG_03206
Chromosome 8, whole genome shotgun sequence.
    
 0.437
UMAG_03264
Chromosome 8, whole genome shotgun sequence.
    
 0.427
UMAG_03504
Chromosome 9, whole genome shotgun sequence.
     
 0.410
Your Current Organism:
Ustilago maydis
NCBI taxonomy Id: 237631
Other names: U. maydis 521, Ustilago maydis 521
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.