STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMAG_04499Methyltranfer_dom domain-containing protein. (284 aa)    
Predicted Functional Partners:
HHF1
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.454
UMAG_12013
Chromosome 15, whole genome shotgun sequence.
   
  0.430
ERG2
C-8 sterol isomerase; Catalyzes the reaction which results in unsaturation at C-7 in the B ring of sterols.
   
 0.428
UMAG_10827
Chromosome 8, whole genome shotgun sequence.
   
 0.419
UMAG_10766
Uncharacterized protein.
   
 0.418
UMAG_03593
Chromosome 9, whole genome shotgun sequence; Belongs to the sterol desaturase family.
   
 
 0.415
UMAG_01837
VHS domain-containing protein.
   
    0.414
UMAG_01305
Uncharacterized protein.
   
 0.404
UMAG_11411
Ribosomal 40S subunit protein S24.
   
  0.401
UMAG_00689
Chromosome 1, whole genome shotgun sequence.
   
  0.400
Your Current Organism:
Ustilago maydis
NCBI taxonomy Id: 237631
Other names: U. maydis 521, Ustilago maydis 521
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.