STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMAG_04317BHLH domain-containing protein. (625 aa)    
Predicted Functional Partners:
UMAG_02582
Regulator Ustilago maydis 1 protein (Rum1).
   
 0.672
UMAG_01883
Uncharacterized protein.
    
 
 0.510
UMAG_11717
HDAC_interact domain-containing protein.
    
 
 0.510
UMAG_10397
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
  0.503
UMAG_04318
Prenylcys_lyase domain-containing protein.
 
 
    0.453
UMAG_05721
Chromosome 16, whole genome shotgun sequence.
    
 0.433
UMAG_10626
BHLH domain-containing protein.
    
 0.423
UMAG_05327
Chromosome 19, whole genome shotgun sequence.
   
 0.417
UMAG_05015
Chromosome 15, whole genome shotgun sequence.
    
  0.402
UMAG_05017
Chromosome 15, whole genome shotgun sequence.
    
  0.402
Your Current Organism:
Ustilago maydis
NCBI taxonomy Id: 237631
Other names: U. maydis 521, Ustilago maydis 521
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.