Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NAR1 | UMAG_11111 | Q05531 | A0A0D1DYM8 | Nitrate reductase [NADPH]; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Chromosome 12, whole genome shotgun sequence. | 0.542 |
UMAG_00227 | UMAG_11111 | A0A0D1EBR9 | A0A0D1DYM8 | Chromosome 1, whole genome shotgun sequence. | Chromosome 12, whole genome shotgun sequence. | 0.444 |
UMAG_01965 | UMAG_11111 | A0A0D1CCA6 | A0A0D1DYM8 | Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily. | Chromosome 12, whole genome shotgun sequence. | 0.454 |
UMAG_11111 | NAR1 | A0A0D1DYM8 | Q05531 | Chromosome 12, whole genome shotgun sequence. | Nitrate reductase [NADPH]; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.542 |
UMAG_11111 | UMAG_00227 | A0A0D1DYM8 | A0A0D1EBR9 | Chromosome 12, whole genome shotgun sequence. | Chromosome 1, whole genome shotgun sequence. | 0.444 |
UMAG_11111 | UMAG_01965 | A0A0D1DYM8 | A0A0D1CCA6 | Chromosome 12, whole genome shotgun sequence. | Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily. | 0.454 |
UMAG_11111 | UMAG_15056 | A0A0D1DYM8 | A0A0D1CXN7 | Chromosome 12, whole genome shotgun sequence. | Uncharacterized protein. | 0.444 |
UMAG_11111 | fer2 | A0A0D1DYM8 | A1A652 | Chromosome 12, whole genome shotgun sequence. | High-affinity iron permease fer2; Permease for high affinity iron uptake. Belongs to the oxidase-dependent Fe transporter (OFeT) (TC 9.A.10.1) family. | 0.585 |
UMAG_15056 | UMAG_11111 | A0A0D1CXN7 | A0A0D1DYM8 | Uncharacterized protein. | Chromosome 12, whole genome shotgun sequence. | 0.444 |
fer2 | UMAG_11111 | A1A652 | A0A0D1DYM8 | High-affinity iron permease fer2; Permease for high affinity iron uptake. Belongs to the oxidase-dependent Fe transporter (OFeT) (TC 9.A.10.1) family. | Chromosome 12, whole genome shotgun sequence. | 0.585 |