STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMAG_00068Chromosome 1, whole genome shotgun sequence. (865 aa)    
Predicted Functional Partners:
UMAG_11848
Putative Myosin regulatory light chain cdc4.
    
 
 0.704
UMAG_03910
Putative calmodulin; Belongs to the calmodulin family.
    
 
 0.704
UMAG_03353
Chromosome 8, whole genome shotgun sequence.
      
 0.602
UMAG_10925
Chromosome 1, whole genome shotgun sequence.
      
 0.602
UMAG_03886
Uncharacterized protein.
      
 0.602
UMAG_10143
Putative TATA-binding protein.
      
 0.590
UMAG_10089
Chromosome 1, whole genome shotgun sequence.
      
 0.443
UMAG_10616
Putative spindle pole body component, centrin.
    
   0.439
UMAG_11437
Chromosome 1, whole genome shotgun sequence.
    
   0.439
UMAG_04448
Uncharacterized protein.
    
   0.439
Your Current Organism:
Ustilago maydis
NCBI taxonomy Id: 237631
Other names: U. maydis 521, Ustilago maydis 521
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.