Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SFA68872.1gamma-F420-2:alpha-L-glutamate ligase. (288 aa)    
Predicted Functional Partners:
SFA68882.1
gamma-F420-2:alpha-L-glutamate ligase; Belongs to the RimK family.
 
  
 
0.977
SFA96006.1
Glutamate synthase (NADPH/NADH) large chain.
    
 0.822
SFA68893.1
Dihydrofolate synthase / folylpolyglutamate synthase; Belongs to the folylpolyglutamate synthase family.
       0.600
SFB27422.1
D-alanine-D-alanine ligase.
 
  
 0.593
SFB27392.1
D-alanine-D-alanine ligase.
 
  
 0.531
SFB27436.1
D-alanine-D-alanine ligase.
 
  
 0.524
SFB27405.1
D-alanine-D-alanine ligase.
 
  
 0.498
SFB27450.1
D-alanine-D-alanine ligase.
 
  
 0.477
SFA68852.1
Spore coat protein YsxE.
  
     0.475
SFB24591.1
Putative sporulation protein YtxC.
  
     0.463
Your Current Organism:
Lentibacillus halodurans
NCBI taxonomy Id: 237679
Other names: Bacillaceae bacterium 8-1, CGMCC 1.3702, DSM 18342, L. halodurans, Lentibacillus halodurans Yuan et al. 2007, strain 8-1
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