rpmG protein (Lentibacillus halodurans) - STRING interaction network

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Score

rpmG

LSU ribosomal protein L33P; Belongs to the bacterial ribosomal protein bL33 family. (49 aa)

Predicted Functional Partners:

rpmB

0.996

rpsD

0.996

rpsR

0.996

rpsI

0.996

rpsO

0.995

rpsT

0.995

rpmF

0.995

rplW

0.995

rpsS

0.995

rpsC

0.995

Your Current Organism:

Lentibacillus halodurans

NCBI taxonomy Id: 237679
Other names: Bacillaceae bacterium 8-1, CGMCC 1.3702, DSM 18342, L. halodurans, Lentibacillus halodurans Yuan et al. 2007, strain 8-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplW	rpmB	SAMN04488072_11735	SAMN04488072_109114	LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family.	0.989
rplW	rpmF	SAMN04488072_11735	SAMN04488072_10947	LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	LSU ribosomal protein L32P; Belongs to the bacterial ribosomal protein bL32 family.	0.994
rplW	rpmG	SAMN04488072_11735	SAMN04488072_101159	LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	LSU ribosomal protein L33P; Belongs to the bacterial ribosomal protein bL33 family.	0.995
rplW	rpsC	SAMN04488072_11735	SAMN04488072_11739	LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.999
rplW	rpsD	SAMN04488072_11735	SAMN04488072_111121	LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.996
rplW	rpsI	SAMN04488072_11735	SAMN04488072_11767	LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family.	0.995
rplW	rpsO	SAMN04488072_11735	SAMN04488072_101486	LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.993
rplW	rpsR	SAMN04488072_11735	SAMN04488072_11438	LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	SSU ribosomal protein S18P; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.995
rplW	rpsS	SAMN04488072_11735	SAMN04488072_11737	LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	SSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.999
rplW	rpsT	SAMN04488072_11735	SAMN04488072_10197	LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	SSU ribosomal protein S20P; Binds directly to 16S ribosomal RNA.	0.975
rpmB	rplW	SAMN04488072_109114	SAMN04488072_11735	LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family.	LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	0.989
rpmB	rpmF	SAMN04488072_109114	SAMN04488072_10947	LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family.	LSU ribosomal protein L32P; Belongs to the bacterial ribosomal protein bL32 family.	0.997
rpmB	rpmG	SAMN04488072_109114	SAMN04488072_101159	LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family.	LSU ribosomal protein L33P; Belongs to the bacterial ribosomal protein bL33 family.	0.996
rpmB	rpsC	SAMN04488072_109114	SAMN04488072_11739	LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family.	SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.989
rpmB	rpsD	SAMN04488072_109114	SAMN04488072_111121	LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family.	SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.992
rpmB	rpsI	SAMN04488072_109114	SAMN04488072_11767	LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family.	SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family.	0.995
rpmB	rpsO	SAMN04488072_109114	SAMN04488072_101486	LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family.	SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.997
rpmB	rpsR	SAMN04488072_109114	SAMN04488072_11438	LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family.	SSU ribosomal protein S18P; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.995
rpmB	rpsS	SAMN04488072_109114	SAMN04488072_11737	LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family.	SSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.990
rpmB	rpsT	SAMN04488072_109114	SAMN04488072_10197	LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family.	SSU ribosomal protein S20P; Binds directly to 16S ribosomal RNA.	0.996