STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA73106.1Peroxiredoxin. (191 aa)    
Predicted Functional Partners:
SFA75646.1
Cytochrome c-type biogenesis protein.
  
 0.955
SFA73119.1
Cytochrome c biogenesis protein.
 
  
 0.911
SFA73139.1
Cytochrome c-type biogenesis protein CcsB.
 
  
 0.854
SFA73170.1
Two-component system, OmpR family, sensor histidine kinase ResE.
  
  
 0.658
SFA73087.1
Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family.
  
    0.632
SFB35476.1
Thiol-disulfide isomerase or thioredoxin.
 
   
 0.513
msrA
Peptide methionine sulfoxide reductase msrA/msrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
  
 0.506
SFA70587.1
Cytochrome c550.
  
 
 
 0.492
SFA77743.1
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
    
   0.487
SFB04374.1
Glutaredoxin-related protein.
  
  
 0.481
Your Current Organism:
Lentibacillus halodurans
NCBI taxonomy Id: 237679
Other names: Bacillaceae bacterium 8-1, CGMCC 1.3702, DSM 18342, L. halodurans, Lentibacillus halodurans Yuan et al. 2007, strain 8-1
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