Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SFA73170.1Two-component system, OmpR family, sensor histidine kinase ResE. (584 aa)    
Predicted Functional Partners:
SFA73155.1
Two-component system, OmpR family, response regulator ResD.
 0.993
SFB30129.1
Two-component system, OmpR family, response regulator VicR.
 0.975
SFB08085.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.973
SFB24776.1
Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP.
 0.963
SFB04729.1
Two-component system, OmpR family, response regulator CssR.
 0.956
SFB06778.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.938
SFA73797.1
Chemotaxis protein methyltransferase CheR.
  
 0.914
SFB12218.1
Ribose transport system substrate-binding protein.
 
 
    0.890
SFB04412.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.864
SFA73139.1
Cytochrome c-type biogenesis protein CcsB.
 
  
 0.862
Your Current Organism:
Lentibacillus halodurans
NCBI taxonomy Id: 237679
Other names: Bacillaceae bacterium 8-1, CGMCC 1.3702, DSM 18342, L. halodurans, Lentibacillus halodurans Yuan et al. 2007, strain 8-1
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