Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
SFA75646.1Cytochrome c-type biogenesis protein. (235 aa)    
Predicted Functional Partners:
SFA75539.1
Peroxiredoxin.
  
 0.984
SFA73106.1
Peroxiredoxin.
  
 0.972
SFA73139.1
Cytochrome c-type biogenesis protein CcsB.
 
  
 0.870
SFA73119.1
Cytochrome c biogenesis protein.
 
  
 0.834
msrA
Peptide methionine sulfoxide reductase msrA/msrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
 0.797
zupT
Zinc transporter, ZIP family; Mediates zinc uptake. May also transport other divalent cations; Belongs to the ZIP transporter (TC 2.A.5) family. ZupT subfamily.
   
    0.643
SFA68806.1
HemX protein.
  
  
 0.639
SFA75611.1
Membrane protein CcdC involved in cytochrome C biogenesis.
     
 0.622
SFA75626.1
Multicomponent Na+:H+ antiporter subunit B.
       0.579
SFA75664.1
Hypothetical protein.
       0.491
Your Current Organism:
Lentibacillus halodurans
NCBI taxonomy Id: 237679
Other names: Bacillaceae bacterium 8-1, CGMCC 1.3702, DSM 18342, L. halodurans, Lentibacillus halodurans Yuan et al. 2007, strain 8-1
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