Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SFA76159.13-oxoacyl-[acyl-carrier protein] reductase. (255 aa)    
Predicted Functional Partners:
SFA96006.1
Glutamate synthase (NADPH/NADH) large chain.
     
 0.858
SFB04689.1
PTS system trehalose-specific IIB component, Glc family (TC 4.A.1.2.8)/PTS system trehalose-specific IIC component, Glc family (TC 4.A.1.2.8).
     
 0.802
SFA76109.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
  0.800
SFB16842.1
Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
  0.787
SFB24860.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 0.778
SFA76091.1
Hypothetical protein.
   
  0.777
SFB22807.1
Short chain dehydrogenase.
  
     0.736
SFA76142.1
Hypothetical protein.
  
    0.711
SFA76196.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
     0.703
SFA76176.1
C4-dicarboxylate transporter, DctM subunit.
    
  0.699
Your Current Organism:
Lentibacillus halodurans
NCBI taxonomy Id: 237679
Other names: Bacillaceae bacterium 8-1, CGMCC 1.3702, DSM 18342, L. halodurans, Lentibacillus halodurans Yuan et al. 2007, strain 8-1
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