Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SFA76842.1Probable sporulation protein, polysaccharide deacetylase family. (318 aa)    
Predicted Functional Partners:
SFA76825.1
Predicted Zn-dependent peptidase; Belongs to the peptidase M16 family.
  
    0.856
SFA76809.1
Sporulation protein, YlmC/YmxH family.
 
   
 0.759
pnp
Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
       0.673
SFB32617.1
Putative sporulation protein YtaF; Probably functions as a manganese efflux pump.
  
   
 0.463
SFA76707.1
ATP-dependent Clp protease proteolytic subunit ClpP.
 
   
 0.447
SFB19108.1
Sporulation protein, YlmC/YmxH family.
  
   
 0.437
rpsO
SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.
       0.432
SFA76787.1
Dipicolinate synthase subunit A.
     
 0.423
SFA76773.1
Dipicolinate synthase subunit B.
  
  
 0.407
SFB06983.1
Spore germination protein.
 
      0.402
Your Current Organism:
Lentibacillus halodurans
NCBI taxonomy Id: 237679
Other names: Bacillaceae bacterium 8-1, CGMCC 1.3702, DSM 18342, L. halodurans, Lentibacillus halodurans Yuan et al. 2007, strain 8-1
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