STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA84427.1Transcriptional regulator, LacI family. (343 aa)    
Predicted Functional Partners:
SFB04689.1
PTS system trehalose-specific IIB component, Glc family (TC 4.A.1.2.8)/PTS system trehalose-specific IIC component, Glc family (TC 4.A.1.2.8).
  
 
 0.916
SFA84440.1
2-dehydro-3-deoxygluconokinase.
 
 
 0.883
SFA96006.1
Glutamate synthase (NADPH/NADH) large chain.
    
 
 0.849
SFA84459.1
3-hexulose-6-phosphate synthase.
 
   
 0.807
SFA84472.1
6-phospho-3-hexuloisomerase.
 
     0.805
SFA91487.1
Phosphocarrier protein.
   
 
 0.759
SFA84484.1
Ureidoglycolate dehydrogenase (NAD+); Belongs to the LDH2/MDH2 oxidoreductase family.
       0.726
SFA99937.1
PTS system IIB component, Glc family (TC 4.A.1)/PTS system IIC component, Glc family (TC 4.A.1).
    
 0.714
SFB00418.1
PTS system N-acetylglucosamine-specific IIB component, Glc family (TC 4.A.1.1.7)/PTS system N-acetylglucosamine-specific IIC component, Glc family (TC 4.A.1.1.7).
    
 0.714
SFB21535.1
PTS system, N-acetylglucosamine-specific IIC component.
    
 0.714
Your Current Organism:
Lentibacillus halodurans
NCBI taxonomy Id: 237679
Other names: Bacillaceae bacterium 8-1, CGMCC 1.3702, DSM 18342, L. halodurans, Lentibacillus halodurans Yuan et al. 2007, strain 8-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.