Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SFA87585.1Predicted arabinose efflux permease, MFS family. (391 aa)    
Predicted Functional Partners:
SFA87598.1
Hypothetical protein.
       0.773
SFA87570.1
Protein of unknown function.
 
     0.618
SFA87555.1
Pyroglutamyl-peptidase; Removes 5-oxoproline from various penultimate amino acid residues except L-proline.
  
    0.544
SFB16524.1
Predicted arabinose efflux permease, MFS family.
      
 0.532
SFA83648.1
MotA/TolQ/ExbB proton channel family protein.
  
     0.483
SFB28398.1
MFS transporter, DHA1 family, multidrug resistance protein B.
  
   
0.462
SFB01332.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit.
     
 0.456
SFA83666.1
Chemotaxis protein MotB.
  
     0.433
Your Current Organism:
Lentibacillus halodurans
NCBI taxonomy Id: 237679
Other names: Bacillaceae bacterium 8-1, CGMCC 1.3702, DSM 18342, L. halodurans, Lentibacillus halodurans Yuan et al. 2007, strain 8-1
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