STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA87612.1Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (506 aa)    
Predicted Functional Partners:
SFA96006.1
Glutamate synthase (NADPH/NADH) large chain.
  
 
 0.927
SFB16600.1
acetyl-CoA synthetase.
   
  0.892
SFB31205.1
acetyl-CoA synthetase.
   
  0.892
SFA87626.1
Hypothetical protein.
 
    0.879
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
 
 
 0.870
SFA85561.1
S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase.
 
 
  0.867
SFA74910.1
Acylphosphatase.
     
 0.852
SFB04689.1
PTS system trehalose-specific IIB component, Glc family (TC 4.A.1.2.8)/PTS system trehalose-specific IIC component, Glc family (TC 4.A.1.2.8).
   
 
 0.852
SFB24860.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 0.779
SFB11407.1
L-proline dehydrogenase.
 
 0.702
Your Current Organism:
Lentibacillus halodurans
NCBI taxonomy Id: 237679
Other names: Bacillaceae bacterium 8-1, CGMCC 1.3702, DSM 18342, L. halodurans, Lentibacillus halodurans Yuan et al. 2007, strain 8-1
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