Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
SFA90265.1Zinc transport system permease protein. (286 aa)    
Predicted Functional Partners:
SFA90280.1
Zinc transport system ATP-binding protein.
 0.999
SFA90298.1
Zinc transport system substrate-binding protein.
 
 
 0.997
SFA90538.1
Zinc-uptake complex component A, substrate-binding.
 
 
 0.989
SFA90518.1
Zinc-uptake complex component A, substrate-binding.
 
 
 0.988
SFA90247.1
Zinc uptake regulator, Fur family; Belongs to the Fur family.
  
  
 0.935
SFA91841.1
Iron complex transport system ATP-binding protein.
    
 0.860
mntR
Iron (metal) dependent repressor, DtxR family; Central regulator of manganese homeostasis. Belongs to the DtxR/MntR family.
  
 
 0.798
SFA81211.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-); Belongs to the ABC transporter superfamily.
    
 0.762
SFB16508.1
Cystine transport system permease protein.
   
 
 0.563
birA
Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
 
     0.516
Your Current Organism:
Lentibacillus halodurans
NCBI taxonomy Id: 237679
Other names: Bacillaceae bacterium 8-1, CGMCC 1.3702, DSM 18342, L. halodurans, Lentibacillus halodurans Yuan et al. 2007, strain 8-1
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