Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SFA87969.1Transcriptional regulator. (111 aa)    
Predicted Functional Partners:
SFB24860.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
     
  0.749
SFB19464.1
Signal peptidase, endoplasmic reticulum-type.
 
  
 0.663
SFB36049.1
Signal peptidase I. Serine peptidase. MEROPS family S26B.
 
  
 0.662
SFA99672.1
Signal peptidase, endoplasmic reticulum-type.
 
  
 0.610
SFA87947.1
Anti-repressor SinI.
       0.568
SFB26165.1
Two-component system, response regulator, stage 0 sporulation protein F.
    
 0.522
lacD
Tagatose 1,6-diphosphate aldolase; Belongs to the aldolase LacD family.
    
  0.518
SFA87984.1
RNA polymerase sigma-70 factor, ECF subfamily.
       0.509
SFA88001.1
Sigma factor regulator C-terminal.
       0.509
SFA72035.1
Two-component system, response regulator, stage 0 sporulation protein A; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.
   
  
 0.497
Your Current Organism:
Lentibacillus halodurans
NCBI taxonomy Id: 237679
Other names: Bacillaceae bacterium 8-1, CGMCC 1.3702, DSM 18342, L. halodurans, Lentibacillus halodurans Yuan et al. 2007, strain 8-1
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