Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SFA88078.1Two-component system, NarL family, sensor histidine kinase DegS; Member of the two-component regulatory system DegS/DegU, which plays an important role in the transition growth phase. (379 aa)    
Predicted Functional Partners:
SFA88094.1
Two component transcriptional regulator, LuxR family.
 0.984
SFA90102.1
Two component transcriptional regulator, LuxR family.
 0.906
SFB31269.1
Two component transcriptional regulator, LuxR family.
 0.902
SFB00884.1
Two component transcriptional regulator, LuxR family.
 
 0.895
SFB28103.1
Two component transcriptional regulator, LuxR family.
 
 0.877
SFA81648.1
Regulatory protein, luxR family.
 
 0.871
SFA73797.1
Chemotaxis protein methyltransferase CheR.
   
  0.781
SFB31258.1
Signal transduction histidine kinase.
  
     0.761
SFB24165.1
Transcriptional regulator.
 
  0.701
SFA90065.1
Lia operon protein LiaF.
  
  
 0.649
Your Current Organism:
Lentibacillus halodurans
NCBI taxonomy Id: 237679
Other names: Bacillaceae bacterium 8-1, CGMCC 1.3702, DSM 18342, L. halodurans, Lentibacillus halodurans Yuan et al. 2007, strain 8-1
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