STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA97378.1Hypothetical protein. (286 aa)    
Predicted Functional Partners:
SFB15326.1
Tetratricopeptide repeat-containing protein.
  
     0.592
SFB36104.1
Hypothetical protein.
  
     0.558
SFA97362.1
Hypothetical protein.
       0.547
SFB01670.1
DNA-binding transcriptional regulator, MarR family.
    
  0.485
SFB36170.1
Hypothetical protein.
  
     0.466
SFB37599.1
Catechol 2,3-dioxygenase.
  
     0.464
SFB30248.1
D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4).
  
     0.452
SFB28398.1
MFS transporter, DHA1 family, multidrug resistance protein B.
  
     0.450
SFA91502.1
Kinase-associated protein B.
  
     0.440
SFA85637.1
Vancomycin resistance protein YoaR, contains peptidoglycan-binding and VanW domains.
  
     0.435
Your Current Organism:
Lentibacillus halodurans
NCBI taxonomy Id: 237679
Other names: Bacillaceae bacterium 8-1, CGMCC 1.3702, DSM 18342, L. halodurans, Lentibacillus halodurans Yuan et al. 2007, strain 8-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.