STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA94039.1Hypothetical protein. (682 aa)    
Predicted Functional Partners:
SFA94052.1
X-X-X-Leu-X-X-Gly heptad repeat-containing protein.
   
 0.977
SFA94025.1
Transcriptional regulator, TetR family.
 
     0.881
SFB27293.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.518
SFA85359.1
Stage VI sporulation protein F.
  
     0.471
SFA90028.1
Lia operon protein LiaI.
  
     0.454
SFA84342.1
Ketosteroid isomerase-related protein.
  
     0.444
SFB27338.1
Teichoic acid transport system ATP-binding protein.
  
     0.408
Your Current Organism:
Lentibacillus halodurans
NCBI taxonomy Id: 237679
Other names: Bacillaceae bacterium 8-1, CGMCC 1.3702, DSM 18342, L. halodurans, Lentibacillus halodurans Yuan et al. 2007, strain 8-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.