Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SFB01346.1Glycine betaine/proline transport system substrate-binding protein. (295 aa)    
Predicted Functional Partners:
SFA81461.1
Glycine betaine/proline transport system substrate-binding protein.
 
 0.998
SFA80681.1
Glycine betaine/proline transport system permease protein.
 
 0.997
SFA80695.1
Glycine betaine/proline transport system ATP-binding protein.
 
 0.961
SFA81446.1
Glycine betaine/proline transport system ATP-binding protein.
 
 0.961
SFA80663.1
Glycine betaine/proline transport system substrate-binding protein.
  
  
  0.727
SFB32769.1
Glycine betaine/proline transport system substrate-binding protein.
  
  
 
0.654
SFB28802.1
Glycine betaine/proline transport system substrate-binding protein.
  
  
 
0.648
SFA81478.1
Glycine betaine/proline transport system substrate-binding protein.
  
  
 
0.633
SFA81492.1
Glycine betaine/proline transport system substrate-binding protein.
  
  
 
0.572
SFA81211.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-); Belongs to the ABC transporter superfamily.
     
  0.540
Your Current Organism:
Lentibacillus halodurans
NCBI taxonomy Id: 237679
Other names: Bacillaceae bacterium 8-1, CGMCC 1.3702, DSM 18342, L. halodurans, Lentibacillus halodurans Yuan et al. 2007, strain 8-1
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