STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA99301.1Tripartite-type tricarboxylate transporter, receptor component TctC. (325 aa)    
Predicted Functional Partners:
SFA99320.1
Putative tricarboxylic transport membrane protein.
 
    0.910
SFB01626.1
Putative tricarboxylic transport membrane protein.
 
    0.832
SFB10900.1
Putative tricarboxylic transport membrane protein.
 
    0.832
SFB21645.1
Putative tricarboxylic transport membrane protein.
 
    0.832
SFB36345.1
Putative tricarboxylic transport membrane protein.
 
    0.832
SFB37754.1
Putative tricarboxylic transport membrane protein.
 
    0.832
SFB01435.1
TctA family transporter.
 
    0.831
SFB10278.1
TctA family transporter.
 
    0.831
panD-2
L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
       0.542
SFA99339.1
Tripartite tricarboxylate transporter TctB family protein.
       0.491
Your Current Organism:
Lentibacillus halodurans
NCBI taxonomy Id: 237679
Other names: Bacillaceae bacterium 8-1, CGMCC 1.3702, DSM 18342, L. halodurans, Lentibacillus halodurans Yuan et al. 2007, strain 8-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.