STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB00522.1Carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-). (432 aa)    
Predicted Functional Partners:
SFB00549.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.984
SFB00535.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.981
SFA81211.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-); Belongs to the ABC transporter superfamily.
 
 0.944
SFB01811.1
Glucose/mannose transport system permease protein.
 
 0.930
SFB11814.1
Multiple sugar transport system permease protein.
 
 0.910
SFB32442.1
N-acetylglucosamine transport system permease protein.
 
 0.886
SFB32455.1
N-acetylglucosamine transport system permease protein.
 
 0.869
SFB11823.1
Multiple sugar transport system permease protein.
 
 0.842
SFB01796.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-).
 
 0.834
SFB00488.1
Xylan 1,4-beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.796
Your Current Organism:
Lentibacillus halodurans
NCBI taxonomy Id: 237679
Other names: Bacillaceae bacterium 8-1, CGMCC 1.3702, DSM 18342, L. halodurans, Lentibacillus halodurans Yuan et al. 2007, strain 8-1
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