STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB04438.1Cadmium-sensing regulator, CadC. (122 aa)    
Predicted Functional Partners:
SFB04450.1
Cd2+/Zn2+-exporting ATPase.
 
  
 0.958
SFA84849.1
DNA-binding transcriptional regulator, ArsR family.
  
     0.769
SFB08434.1
ArsR family transcriptional regulator.
 
  
 0.751
SFA84227.1
Cu2+-exporting ATPase.
 
  
 0.536
SFA84267.1
Cu+-exporting ATPase.
 
  
 0.529
SFB04424.1
Glyoxalase-like domain-containing protein.
       0.424
Your Current Organism:
Lentibacillus halodurans
NCBI taxonomy Id: 237679
Other names: Bacillaceae bacterium 8-1, CGMCC 1.3702, DSM 18342, L. halodurans, Lentibacillus halodurans Yuan et al. 2007, strain 8-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.