Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SFB06983.1Spore germination protein. (470 aa)    
Predicted Functional Partners:
SFB16585.1
peptidoglycan-N-acetylmuramic acid deacetylase.
 
      0.828
SFB06998.1
Fatty-acid peroxygenase.
       0.449
SFB37485.1
Polysaccharide deacetylase family sporulation protein PdaB.
 
      0.433
SFA73442.1
N-acetylmuramoyl-L-alanine amidase.
 
     0.425
SFA71669.1
Stage III sporulation protein AB.
  
     0.403
SFA76842.1
Probable sporulation protein, polysaccharide deacetylase family.
 
      0.402
Your Current Organism:
Lentibacillus halodurans
NCBI taxonomy Id: 237679
Other names: Bacillaceae bacterium 8-1, CGMCC 1.3702, DSM 18342, L. halodurans, Lentibacillus halodurans Yuan et al. 2007, strain 8-1
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