STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB04754.1Hypothetical protein. (258 aa)    
Predicted Functional Partners:
bdbC
Disulfide bond formation protein DsbB; Required for disulfide bond formation in some proteins. Belongs to the DsbB family. BdbC subfamily.
  
 
 0.779
SFA81613.1
Lia operon protein LiaF.
  
     0.595
SFA96378.1
ABC-2 type transport system permease protein.
  
     0.542
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
     
 0.493
SFB04374.1
Glutaredoxin-related protein.
  
  
 0.491
SFB04741.1
Serine protease Do.
     
 0.490
SFB39403.1
Tetratricopeptide repeat-containing protein.
 
   
 0.486
SFA77252.1
Chemotaxis protein CheC.
    
   0.465
SFA77464.1
Flagellar motor switch protein FliN/FliY.
    
   0.465
SFA88389.1
Hypothetical protein.
  
     0.430
Your Current Organism:
Lentibacillus halodurans
NCBI taxonomy Id: 237679
Other names: Bacillaceae bacterium 8-1, CGMCC 1.3702, DSM 18342, L. halodurans, Lentibacillus halodurans Yuan et al. 2007, strain 8-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.