Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SFB04953.1Peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK. (190 aa)    
Predicted Functional Partners:
SFB39827.1
N-acetylmuramoyl-L-alanine amidase.
    
 0.787
SFA83779.1
N-acetylmuramoyl-L-alanine amidase.
    
 0.783
SFA69313.1
N-acetylmuramoyl-L-alanine amidase.
    
 0.667
SFB10200.1
N-acetylmuramoyl-L-alanine amidase.
    
 0.667
SFA96245.1
N-acetylmuramoyl-L-alanine amidase.
    
 0.651
SFB36220.1
Pyridoxamine 5'-phosphate oxidase.
  
     0.542
SFB04966.1
Glyoxalase family protein.
       0.517
plsY-2
Glycerol-3-phosphate acyltransferase PlsY; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.
       0.484
SFB01641.1
RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily.
  
    0.483
SFB04931.1
Hypothetical protein.
       0.451
Your Current Organism:
Lentibacillus halodurans
NCBI taxonomy Id: 237679
Other names: Bacillaceae bacterium 8-1, CGMCC 1.3702, DSM 18342, L. halodurans, Lentibacillus halodurans Yuan et al. 2007, strain 8-1
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