SFB05386.1 protein (Lentibacillus halodurans)

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SFB05386.1

ATPase components of ABC transporters with duplicated ATPase domains. (542 aa)

Predicted Functional Partners:

rplU

0.788

rplD

0.786

rpsC

0.786

rpsO

0.784

rpmD

0.782

rpmH

0.776

rplT

0.770

rpsJ

0.770

rplC

0.770

rpsS

0.770

Your Current Organism:

Lentibacillus halodurans

NCBI taxonomy Id: 237679
Other names: Bacillaceae bacterium 8-1, CGMCC 1.3702, DSM 18342, L. halodurans, Lentibacillus halodurans Yuan et al. 2007, strain 8-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SFB05386.1	rplC	SAMN04488072_10686	SAMN04488072_11733	ATPase components of ABC transporters with duplicated ATPase domains.	LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.770
SFB05386.1	rplD	SAMN04488072_10686	SAMN04488072_11734	ATPase components of ABC transporters with duplicated ATPase domains.	LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel.	0.786
SFB05386.1	rplT	SAMN04488072_10686	SAMN04488072_11153	ATPase components of ABC transporters with duplicated ATPase domains.	Large subunit ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.770
SFB05386.1	rplU	SAMN04488072_10686	SAMN04488072_10124	ATPase components of ABC transporters with duplicated ATPase domains.	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.788
SFB05386.1	rpmD	SAMN04488072_10686	SAMN04488072_11751	ATPase components of ABC transporters with duplicated ATPase domains.	LSU ribosomal protein L30P.	0.782
SFB05386.1	rpmH	SAMN04488072_10686	SAMN04488072_11418	ATPase components of ABC transporters with duplicated ATPase domains.	Large subunit ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.	0.776
SFB05386.1	rpsC	SAMN04488072_10686	SAMN04488072_11739	ATPase components of ABC transporters with duplicated ATPase domains.	SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.786
SFB05386.1	rpsJ	SAMN04488072_10686	SAMN04488072_11732	ATPase components of ABC transporters with duplicated ATPase domains.	SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.770
SFB05386.1	rpsO	SAMN04488072_10686	SAMN04488072_101486	ATPase components of ABC transporters with duplicated ATPase domains.	SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.784
SFB05386.1	rpsS	SAMN04488072_10686	SAMN04488072_11737	ATPase components of ABC transporters with duplicated ATPase domains.	SSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.770
rplC	SFB05386.1	SAMN04488072_11733	SAMN04488072_10686	LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	ATPase components of ABC transporters with duplicated ATPase domains.	0.770
rplC	rplD	SAMN04488072_11733	SAMN04488072_11734	LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel.	0.999
rplC	rplT	SAMN04488072_11733	SAMN04488072_11153	LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Large subunit ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.997
rplC	rplU	SAMN04488072_11733	SAMN04488072_10124	LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.996
rplC	rpmD	SAMN04488072_11733	SAMN04488072_11751	LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	LSU ribosomal protein L30P.	0.997
rplC	rpmH	SAMN04488072_11733	SAMN04488072_11418	LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Large subunit ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.	0.975
rplC	rpsC	SAMN04488072_11733	SAMN04488072_11739	LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.999
rplC	rpsJ	SAMN04488072_11733	SAMN04488072_11732	LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.999
rplC	rpsO	SAMN04488072_11733	SAMN04488072_101486	LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.994
rplC	rpsS	SAMN04488072_11733	SAMN04488072_11737	LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	SSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.999