STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB12562.1PTS system, N-acetylgalactosamine-specific IIB component. (159 aa)    
Predicted Functional Partners:
SFB12578.1
PTS system, N-acetylgalactosamine-specific IIC component.
 0.999
SFB12631.1
PTS system, N-acetylgalactosamine-specific IIA component.
 
 
 0.998
SFB12610.1
PTS system, N-acetylgalactosamine-specific IID component.
 0.997
SFB12593.1
PTS system mannose/fructose/sorbose family IID component.
 
 0.995
SFB12541.1
Tagatose-6-phosphate ketose/aldose isomerase.
 
  
 0.941
SFB10988.1
PTS system D-mannose-specific IIA component, Fru family (TC 4.A.2.1.6)/PTS system D-mannose-specific IIB component, Fru family (TC 4.A.2.1.6)/PTS system D-mannose-specific IIC component, Fru family (TC 4.A.2.1.6).
  
 
 0.936
SFB11182.1
Uncharacterized protein; PTS system D-fructose-specific IIA component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIB component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIC component (F1P-forming), Frc family (TC 4.A.2.1.4).
  
 
 0.936
SFA91487.1
Phosphocarrier protein.
 
 
 0.868
SFA89174.1
Phosphotransferase system HPr (HPr) family.
   
 0.845
SFB12649.1
Tagatose 6-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
 
  
 0.734
Your Current Organism:
Lentibacillus halodurans
NCBI taxonomy Id: 237679
Other names: Bacillaceae bacterium 8-1, CGMCC 1.3702, DSM 18342, L. halodurans, Lentibacillus halodurans Yuan et al. 2007, strain 8-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.