STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
potAiron(III) transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (367 aa)    
Predicted Functional Partners:
SFB10719.1
iron(III) transport system permease protein.
 
 0.975
SFB10687.1
iron(III) transport system substrate-binding protein.
 
 
 0.956
SFB30029.1
Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
 0.949
SFB14201.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     
0.899
SFB35487.1
ATP-binding cassette, subfamily B, MsbA.
 
 
   
0.803
SFB08737.1
iron(III) transport system permease protein.
 
 0.786
SFB22342.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 
    0.746
SFB08722.1
iron(III) transport system substrate-binding protein.
 
 
 0.738
SFB12725.1
Energy-coupling factor transport system ATP-binding protein.
 
   
0.732
SFB11814.1
Multiple sugar transport system permease protein.
 
  
 0.712
Your Current Organism:
Lentibacillus halodurans
NCBI taxonomy Id: 237679
Other names: Bacillaceae bacterium 8-1, CGMCC 1.3702, DSM 18342, L. halodurans, Lentibacillus halodurans Yuan et al. 2007, strain 8-1
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