Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SFB15224.1Protein of unknown function. (353 aa)    
Predicted Functional Partners:
SFB15242.1
Trp operon repressor family.
 
    0.889
SFA83532.1
Lactocepin; Belongs to the peptidase S8 family.
  
 0.888
SFB32524.1
Hypothetical protein.
    
   0.724
SFA76668.1
DNA translocase FtsK; Belongs to the FtsK/SpoIIIE/SftA family.
    
 
 0.702
SFB37008.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family; Belongs to the FtsK/SpoIIIE/SftA family.
    
 
 0.702
SFA88544.1
Carboxyl-terminal processing protease; Belongs to the peptidase S41A family.
  
   0.678
SFB19478.1
Hypothetical protein.
  
 0.637
SFA91676.1
Bacillopeptidase F. Serine peptidase. MEROPS family S08A.
 
 0.572
SFB15207.1
Adenine deaminase.
       0.553
SFB04800.1
Serine protease AprX; Belongs to the peptidase S8 family.
 
 0.506
Your Current Organism:
Lentibacillus halodurans
NCBI taxonomy Id: 237679
Other names: Bacillaceae bacterium 8-1, CGMCC 1.3702, DSM 18342, L. halodurans, Lentibacillus halodurans Yuan et al. 2007, strain 8-1
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