Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SFB20614.1Hypothetical protein. (592 aa)    
Predicted Functional Partners:
SFA83532.1
Lactocepin; Belongs to the peptidase S8 family.
  
 0.888
SFB20626.1
Flagellar biosynthesis protein.
       0.842
SFA77591.1
Hook-length control protein FliK.
 
     0.772
SFA77431.1
Flagellar protein FliO/FliZ.
 
     0.770
SFA77501.1
Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
    0.768
SFA88197.1
FlgN protein.
  
     0.767
SFB37156.1
Hypothetical protein.
  
     0.767
SFA77638.1
Flagellar FliJ protein.
  
     0.756
SFA73474.1
c-di-GMP-binding flagellar brake protein YcgR, contains PilZNR and PilZ domains.
  
     0.744
SFB32524.1
Hypothetical protein.
    
   0.724
Your Current Organism:
Lentibacillus halodurans
NCBI taxonomy Id: 237679
Other names: Bacillaceae bacterium 8-1, CGMCC 1.3702, DSM 18342, L. halodurans, Lentibacillus halodurans Yuan et al. 2007, strain 8-1
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