Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SFB19507.1Peroxiredoxin, Ohr subfamily. (143 aa)    
Predicted Functional Partners:
SFA84356.1
DNA-binding transcriptional regulator, MarR family.
 
  
 0.945
SFA84290.1
Catalase.
  
  
 0.724
SFA75905.1
Starvation-inducible DNA-binding protein; Belongs to the Dps family.
  
  
 0.685
SFB36220.1
Pyridoxamine 5'-phosphate oxidase.
  
    0.663
SFB02200.1
GAF domain-containing protein.
   
    0.640
SFB19492.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
     
 0.581
SFB07467.1
Protease I.
  
    0.570
SFB31217.1
Protease I.
  
    0.570
SFB30462.1
Putative serine protein kinase, PrkA.
   
    0.560
SFA93907.1
Hypothetical protein.
    0.422
Your Current Organism:
Lentibacillus halodurans
NCBI taxonomy Id: 237679
Other names: Bacillaceae bacterium 8-1, CGMCC 1.3702, DSM 18342, L. halodurans, Lentibacillus halodurans Yuan et al. 2007, strain 8-1
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