Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SFB21660.1Putative tricarboxylic transport membrane protein. (155 aa)    
Predicted Functional Partners:
SFB21673.1
Putative tricarboxylic transport membrane protein.
 
    0.928
SFB21645.1
Putative tricarboxylic transport membrane protein.
 
    0.919
SFB21702.1
Two-component system, CitB family, sensor histidine kinase CitS.
 
     0.694
SFB21687.1
Two-component system, CitB family, response regulator CitT.
 
     0.552
SFB10872.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
 
    0.515
SFB10900.1
Putative tricarboxylic transport membrane protein.
 
    0.495
SFB21632.1
Anion transporter.
 
     0.489
SFA99320.1
Putative tricarboxylic transport membrane protein.
 
    0.485
SFB36345.1
Putative tricarboxylic transport membrane protein.
 
    0.475
SFB01435.1
TctA family transporter.
 
    0.463
Your Current Organism:
Lentibacillus halodurans
NCBI taxonomy Id: 237679
Other names: Bacillaceae bacterium 8-1, CGMCC 1.3702, DSM 18342, L. halodurans, Lentibacillus halodurans Yuan et al. 2007, strain 8-1
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