STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB21687.1Two-component system, CitB family, response regulator CitT. (226 aa)    
Predicted Functional Partners:
SFB21702.1
Two-component system, CitB family, sensor histidine kinase CitS.
 0.997
SFB12042.1
Two-component system, CitB family, sensor histidine kinase DctS.
 0.957
SFA77464.1
Flagellar motor switch protein FliN/FliY.
   
 
  0.819
SFB21673.1
Putative tricarboxylic transport membrane protein.
 
    0.755
SFB21660.1
Putative tricarboxylic transport membrane protein.
 
     0.552
SFB01763.1
Two-component system, response regulator YesN.
  
  
0.538
SFB28985.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
    
 0.517
SFB21645.1
Putative tricarboxylic transport membrane protein.
 
     0.498
SFA73797.1
Chemotaxis protein methyltransferase CheR.
    
  0.487
SFB14830.1
PAS domain S-box-containing protein.
  
  
 0.463
Your Current Organism:
Lentibacillus halodurans
NCBI taxonomy Id: 237679
Other names: Bacillaceae bacterium 8-1, CGMCC 1.3702, DSM 18342, L. halodurans, Lentibacillus halodurans Yuan et al. 2007, strain 8-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.