STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB22003.1Transcriptional regulator, LytTR family. (315 aa)    
Predicted Functional Partners:
SFA94969.1
Two-component system, LytT family, sensor histidine kinase LytS.
 
 0.914
SFB22032.1
ABC-2 type transport system permease protein.
 
     0.890
SFB22020.1
ABC-2 type transport system ATP-binding protein.
 
    0.865
SFB01749.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 
 0.824
SFA94950.1
Two component transcriptional regulator, LytTR family.
  
  
  0.691
SFB07927.1
AraC-type DNA-binding protein.
  
  
  0.593
SFB08105.1
Signal transduction histidine kinase.
  
   
 0.489
SFA81113.1
Signal transduction histidine kinase.
 
 
 0.470
SFB01763.1
Two-component system, response regulator YesN.
  
  
 0.459
fosB
Metallothiol transferase; Metallothiol transferase which confers resistance to fosfomycin by catalyzing the addition of a thiol cofactor to fosfomycin. L-cysteine is probably the physiological thiol donor. Belongs to the fosfomycin resistance protein family. FosB subfamily.
  
     0.431
Your Current Organism:
Lentibacillus halodurans
NCBI taxonomy Id: 237679
Other names: Bacillaceae bacterium 8-1, CGMCC 1.3702, DSM 18342, L. halodurans, Lentibacillus halodurans Yuan et al. 2007, strain 8-1
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