Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SFB22020.1ABC-2 type transport system ATP-binding protein. (282 aa)    
Predicted Functional Partners:
SFB22032.1
ABC-2 type transport system permease protein.
 
 
  0.946
SFB22003.1
Transcriptional regulator, LytTR family.
 
     0.865
ecfA-2
Energy-coupling factor transport system ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
  
 
0.859
SFB04576.1
ABC-2 type transport system permease protein.
  
 0.635
SFA84386.1
ABC-2 type transport system permease protein.
 
    0.533
SFB07188.1
ABC-2 type transport system permease protein.
  
   0.488
SFB15790.1
ABC-2 type transport system permease protein.
  
    0.459
SFB12333.1
NitT/TauT family transport system ATP-binding protein.
 
    
0.422
atpC
F-type H+-transporting ATPase subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
   0.410
SFB27323.1
Teichoic acid transport system permease protein.
    
 0.405
Your Current Organism:
Lentibacillus halodurans
NCBI taxonomy Id: 237679
Other names: Bacillaceae bacterium 8-1, CGMCC 1.3702, DSM 18342, L. halodurans, Lentibacillus halodurans Yuan et al. 2007, strain 8-1
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