Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SFB22227.1Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family. (242 aa)    
Predicted Functional Partners:
SFB04689.1
PTS system trehalose-specific IIB component, Glc family (TC 4.A.1.2.8)/PTS system trehalose-specific IIC component, Glc family (TC 4.A.1.2.8).
    
 0.879
SFA99937.1
PTS system IIB component, Glc family (TC 4.A.1)/PTS system IIC component, Glc family (TC 4.A.1).
    
  0.798
SFB00418.1
PTS system N-acetylglucosamine-specific IIB component, Glc family (TC 4.A.1.1.7)/PTS system N-acetylglucosamine-specific IIC component, Glc family (TC 4.A.1.1.7).
    
  0.798
SFB21535.1
PTS system, N-acetylglucosamine-specific IIC component.
    
  0.798
SFB22214.1
Type I phosphodiesterase / nucleotide pyrophosphatase.
       0.631
SFB29909.1
Hypothetical protein.
  
 
   0.552
SFA90709.1
Cysteine desulfurase / selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
    
   0.471
SFB29900.1
Aminotransferase class-V.
    
   0.471
SFA97239.1
Cardiolipin synthase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.
  
 
  0.452
Your Current Organism:
Lentibacillus halodurans
NCBI taxonomy Id: 237679
Other names: Bacillaceae bacterium 8-1, CGMCC 1.3702, DSM 18342, L. halodurans, Lentibacillus halodurans Yuan et al. 2007, strain 8-1
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