Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SFB26672.1Dipeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (335 aa)    
Predicted Functional Partners:
SFB26641.1
Dipeptide transport system permease protein.
  0.997
SFB26657.1
Dipeptide transport system permease protein.
  0.997
SFA96883.1
Oligopeptide transport system permease protein.
  0.987
SFA96997.1
Peptide/nickel transport system permease protein.
  0.984
SFB10489.1
Peptide/nickel transport system permease protein.
  0.979
SFB14145.1
Peptide/nickel transport system permease protein.
  0.978
SFA89280.1
Peptide/nickel transport system permease protein.
  0.974
SFA84718.1
Peptide/nickel transport system permease protein.
  0.973
SFB26685.1
Dipeptide transport system substrate-binding protein.
 
 
 0.915
SFB14233.1
Putative ABC transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
    
0.893
Your Current Organism:
Lentibacillus halodurans
NCBI taxonomy Id: 237679
Other names: Bacillaceae bacterium 8-1, CGMCC 1.3702, DSM 18342, L. halodurans, Lentibacillus halodurans Yuan et al. 2007, strain 8-1
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