STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB30141.1PAS/PAC sensor signal transduction histidine kinase. (608 aa)    
Predicted Functional Partners:
SFB30129.1
Two-component system, OmpR family, response regulator VicR.
 0.997
SFB30151.1
Two-component signal transduction system YycFG, regulatory protein YycH.
 
  
 0.945
SFB24776.1
Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP.
 0.909
SFA73797.1
Chemotaxis protein methyltransferase CheR.
   
  0.906
SFA73155.1
Two-component system, OmpR family, response regulator ResD.
 0.904
SFB08085.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.891
SFB04412.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.891
SFB30164.1
Two-component signal transduction system YycFG, regulatory protein YycI.
 
  
 0.886
SFB04729.1
Two-component system, OmpR family, response regulator CssR.
 0.879
SFB30176.1
Phosphoribosyl 1,2-cyclic phosphodiesterase.
  
  
 0.867
Your Current Organism:
Lentibacillus halodurans
NCBI taxonomy Id: 237679
Other names: Bacillaceae bacterium 8-1, CGMCC 1.3702, DSM 18342, L. halodurans, Lentibacillus halodurans Yuan et al. 2007, strain 8-1
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