Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SFB30188.1htrA-like peptidase. Serine peptidase. MEROPS family S01B. (405 aa)    
Predicted Functional Partners:
SFA80741.1
Trypsin-like peptidase domain-containing protein.
  
  
 
0.832
secD
SecD/SecF fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
  
 
 0.825
SFB30164.1
Two-component signal transduction system YycFG, regulatory protein YycI.
  
  
 0.682
SFB30141.1
PAS/PAC sensor signal transduction histidine kinase.
 
    0.669
SFB30176.1
Phosphoribosyl 1,2-cyclic phosphodiesterase.
  
  
 0.635
SFB30129.1
Two-component system, OmpR family, response regulator VicR.
  
  
 0.630
SFB30151.1
Two-component signal transduction system YycFG, regulatory protein YycH.
  
  
 0.625
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
   
 0.622
SFA88749.1
Phage shock protein C (PspC) family protein.
  
  
 0.593
SFA73903.1
Tetratricopeptide repeat-containing protein.
   
  0.588
Your Current Organism:
Lentibacillus halodurans
NCBI taxonomy Id: 237679
Other names: Bacillaceae bacterium 8-1, CGMCC 1.3702, DSM 18342, L. halodurans, Lentibacillus halodurans Yuan et al. 2007, strain 8-1
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