Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SFB31294.1ABC-2 type transport system permease protein. (423 aa)    
Predicted Functional Partners:
SFB31280.1
ABC-2 type transport system ATP-binding protein.
 
  
 0.952
SFB31307.1
ABC-2 type transport system permease protein.
 
  
0.894
SFB31258.1
Signal transduction histidine kinase.
 
  
 0.811
SFA70920.1
Hypothetical protein.
  
     0.560
ftsL
Cell division protein FtsL; Essential cell division protein; Belongs to the FtsL family.
  
     0.550
SFB31269.1
Two component transcriptional regulator, LuxR family.
 
   
 0.548
SFB26875.1
DNA-directed RNA polymerase subunit beta.
 
    0.511
SFB24500.1
ABC-2 type transport system ATP-binding protein.
 
  
 0.500
SFA89666.1
Nitroreductase.
  
    0.486
SFB05568.1
Nitroreductase.
  
    0.486
Your Current Organism:
Lentibacillus halodurans
NCBI taxonomy Id: 237679
Other names: Bacillaceae bacterium 8-1, CGMCC 1.3702, DSM 18342, L. halodurans, Lentibacillus halodurans Yuan et al. 2007, strain 8-1
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