Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
SFB31380.1Inhibitor of sigma-G Gin. (63 aa)    
Predicted Functional Partners:
SFB31393.1
Lysine decarboxylase.
       0.690
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
       0.673
SFB31419.1
Uncharacterized protein YaaQ.
       0.602
SFB31369.1
Inhibitor of the pro-sigma K processing machinery.
  
  
 0.544
SFB31439.1
DNA polymerase-3 subunit delta'.
       0.451
SFB31451.1
Cell fate regulator YaaT, PSP1 superfamily (controls sporulation, competence, biofilm development).
       0.451
SFB31428.1
Hypothetical protein.
       0.437
SFB31463.1
Regulator of replication initiation timing; Involved in initiation control of chromosome replication. Belongs to the YabA family.
       0.414
Your Current Organism:
Lentibacillus halodurans
NCBI taxonomy Id: 237679
Other names: Bacillaceae bacterium 8-1, CGMCC 1.3702, DSM 18342, L. halodurans, Lentibacillus halodurans Yuan et al. 2007, strain 8-1
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