Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
SFB31600.1Small acid-soluble spore protein F (minor alpha/beta-type SASP). (55 aa)    
Predicted Functional Partners:
SFA76506.1
Protein of unknown function.
  
    0.711
SFB31586.1
Uncharacterized protein Veg.
 
     0.681
ispE
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.
       0.626
SFB31623.1
Purine operon repressor, PurR.
 
     0.618
SFA72610.1
TIGR00375 family protein.
  
     0.591
SFB31572.1
Spore coat assemly protein.
 
     0.591
SFB37505.1
Spore germination protein D.
  
    0.554
SFB18781.1
Transcription factor, RsfA family.
  
     0.530
SFB14332.1
Spore germination protein.
  
     0.529
tlp
Small acid-soluble spore protein (thioredoxin-like protein); Belongs to the Tlp family.
  
  
 0.523
Your Current Organism:
Lentibacillus halodurans
NCBI taxonomy Id: 237679
Other names: Bacillaceae bacterium 8-1, CGMCC 1.3702, DSM 18342, L. halodurans, Lentibacillus halodurans Yuan et al. 2007, strain 8-1
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