Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
SFB31863.1Ca-activated chloride channel family protein. (254 aa)    
Predicted Functional Partners:
SFB31876.1
Serine/threonine protein kinase.
 
  
 0.989
SFB31848.1
Stage II sporulation protein E.
 
  
 0.968
SFA68844.1
Stage VI sporulation protein D.
  
    0.805
SFB31802.1
Spore cortex biosynthesis protein YabQ.
 
     0.779
SFB24122.1
Germination protein M.
  
    0.778
SFA68974.1
Stage IV sporulation protein FA.
  
    0.777
SFA71575.1
Conserved membrane protein YqhR.
  
     0.773
SFA82413.1
Protein of unknown function.
  
     0.769
SFA71741.1
Stage III sporulation protein AF.
  
     0.767
SFA71333.1
Protein YqhG of unknown function.
  
     0.765
Your Current Organism:
Lentibacillus halodurans
NCBI taxonomy Id: 237679
Other names: Bacillaceae bacterium 8-1, CGMCC 1.3702, DSM 18342, L. halodurans, Lentibacillus halodurans Yuan et al. 2007, strain 8-1
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