Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SFB31876.1Serine/threonine protein kinase. (310 aa)    
Predicted Functional Partners:
SFB31863.1
Ca-activated chloride channel family protein.
 
  
 0.989
SFB31848.1
Stage II sporulation protein E.
 
 
 0.960
ribBA
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
 
 0.855
SFA87878.1
Double zinc ribbon.
   
 
 0.779
SFA71575.1
Conserved membrane protein YqhR.
  
     0.763
SFB24122.1
Germination protein M.
  
     0.760
SFB31802.1
Spore cortex biosynthesis protein YabQ.
 
     0.756
SFA68844.1
Stage VI sporulation protein D.
  
     0.755
SFA71741.1
Stage III sporulation protein AF.
  
     0.740
SFA82413.1
Protein of unknown function.
  
     0.740
Your Current Organism:
Lentibacillus halodurans
NCBI taxonomy Id: 237679
Other names: Bacillaceae bacterium 8-1, CGMCC 1.3702, DSM 18342, L. halodurans, Lentibacillus halodurans Yuan et al. 2007, strain 8-1
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