STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB32617.1Putative sporulation protein YtaF; Probably functions as a manganese efflux pump. (206 aa)    
Predicted Functional Partners:
SFA71727.1
Stage III sporulation protein AE.
  
     0.734
SFA69475.1
Hypothetical protein.
  
     0.710
SFA71761.1
Stage III sporulation protein AG.
  
     0.676
SFB31848.1
Stage II sporulation protein E.
  
     0.670
SFA76787.1
Dipicolinate synthase subunit A.
  
     0.668
SFA70348.1
Similar to stage IV sporulation protein.
  
     0.667
SFA72019.1
Stage IV sporulation protein B.
  
     0.663
SFB18687.1
Sporulation integral membrane protein YlbJ.
  
     0.657
coaE
dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
  
    0.639
SFA90816.1
Sporulation protein YunB.
  
     0.635
Your Current Organism:
Lentibacillus halodurans
NCBI taxonomy Id: 237679
Other names: Bacillaceae bacterium 8-1, CGMCC 1.3702, DSM 18342, L. halodurans, Lentibacillus halodurans Yuan et al. 2007, strain 8-1
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