Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFB31623.1 | SFB33741.1 | SAMN04488072_11556 | SAMN04488072_1178 | Purine operon repressor, PurR. | Uncharacterized conserved protein YacL, contains PIN and TRAM domains. | 0.433 |
| SFB33667.1 | SFB33682.1 | SAMN04488072_1173 | SAMN04488072_1174 | Transcriptional regulator CtsR; Belongs to the CtsR family. | Protein-arginine kinase activator protein McsA. | 0.987 |
| SFB33667.1 | SFB33741.1 | SAMN04488072_1173 | SAMN04488072_1178 | Transcriptional regulator CtsR; Belongs to the CtsR family. | Uncharacterized conserved protein YacL, contains PIN and TRAM domains. | 0.711 |
| SFB33667.1 | mcsB | SAMN04488072_1173 | SAMN04488072_1175 | Transcriptional regulator CtsR; Belongs to the CtsR family. | Protein arginine kinase; Catalyzes the specific phosphorylation of arginine residues in a large number of proteins. Is part of the bacterial stress response system. Protein arginine phosphorylation has a physiologically important role and is involved in the regulation of many critical cellular processes, such as protein homeostasis, motility, competence, and stringent and stress responses, by regulating gene expression and protein activity. | 0.972 |
| SFB33667.1 | radA | SAMN04488072_1173 | SAMN04488072_1177 | Transcriptional regulator CtsR; Belongs to the CtsR family. | DNA repair protein RadA/Sms; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. | 0.541 |
| SFB33682.1 | SFB33667.1 | SAMN04488072_1174 | SAMN04488072_1173 | Protein-arginine kinase activator protein McsA. | Transcriptional regulator CtsR; Belongs to the CtsR family. | 0.987 |
| SFB33682.1 | SFB33741.1 | SAMN04488072_1174 | SAMN04488072_1178 | Protein-arginine kinase activator protein McsA. | Uncharacterized conserved protein YacL, contains PIN and TRAM domains. | 0.626 |
| SFB33682.1 | mcsB | SAMN04488072_1174 | SAMN04488072_1175 | Protein-arginine kinase activator protein McsA. | Protein arginine kinase; Catalyzes the specific phosphorylation of arginine residues in a large number of proteins. Is part of the bacterial stress response system. Protein arginine phosphorylation has a physiologically important role and is involved in the regulation of many critical cellular processes, such as protein homeostasis, motility, competence, and stringent and stress responses, by regulating gene expression and protein activity. | 0.997 |
| SFB33682.1 | radA | SAMN04488072_1174 | SAMN04488072_1177 | Protein-arginine kinase activator protein McsA. | DNA repair protein RadA/Sms; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. | 0.616 |
| SFB33741.1 | SFB31623.1 | SAMN04488072_1178 | SAMN04488072_11556 | Uncharacterized conserved protein YacL, contains PIN and TRAM domains. | Purine operon repressor, PurR. | 0.433 |
| SFB33741.1 | SFB33667.1 | SAMN04488072_1178 | SAMN04488072_1173 | Uncharacterized conserved protein YacL, contains PIN and TRAM domains. | Transcriptional regulator CtsR; Belongs to the CtsR family. | 0.711 |
| SFB33741.1 | SFB33682.1 | SAMN04488072_1178 | SAMN04488072_1174 | Uncharacterized conserved protein YacL, contains PIN and TRAM domains. | Protein-arginine kinase activator protein McsA. | 0.626 |
| SFB33741.1 | mcsB | SAMN04488072_1178 | SAMN04488072_1175 | Uncharacterized conserved protein YacL, contains PIN and TRAM domains. | Protein arginine kinase; Catalyzes the specific phosphorylation of arginine residues in a large number of proteins. Is part of the bacterial stress response system. Protein arginine phosphorylation has a physiologically important role and is involved in the regulation of many critical cellular processes, such as protein homeostasis, motility, competence, and stringent and stress responses, by regulating gene expression and protein activity. | 0.607 |
| SFB33741.1 | radA | SAMN04488072_1178 | SAMN04488072_1177 | Uncharacterized conserved protein YacL, contains PIN and TRAM domains. | DNA repair protein RadA/Sms; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. | 0.800 |
| mcsB | SFB33667.1 | SAMN04488072_1175 | SAMN04488072_1173 | Protein arginine kinase; Catalyzes the specific phosphorylation of arginine residues in a large number of proteins. Is part of the bacterial stress response system. Protein arginine phosphorylation has a physiologically important role and is involved in the regulation of many critical cellular processes, such as protein homeostasis, motility, competence, and stringent and stress responses, by regulating gene expression and protein activity. | Transcriptional regulator CtsR; Belongs to the CtsR family. | 0.972 |
| mcsB | SFB33682.1 | SAMN04488072_1175 | SAMN04488072_1174 | Protein arginine kinase; Catalyzes the specific phosphorylation of arginine residues in a large number of proteins. Is part of the bacterial stress response system. Protein arginine phosphorylation has a physiologically important role and is involved in the regulation of many critical cellular processes, such as protein homeostasis, motility, competence, and stringent and stress responses, by regulating gene expression and protein activity. | Protein-arginine kinase activator protein McsA. | 0.997 |
| mcsB | SFB33741.1 | SAMN04488072_1175 | SAMN04488072_1178 | Protein arginine kinase; Catalyzes the specific phosphorylation of arginine residues in a large number of proteins. Is part of the bacterial stress response system. Protein arginine phosphorylation has a physiologically important role and is involved in the regulation of many critical cellular processes, such as protein homeostasis, motility, competence, and stringent and stress responses, by regulating gene expression and protein activity. | Uncharacterized conserved protein YacL, contains PIN and TRAM domains. | 0.607 |
| mcsB | radA | SAMN04488072_1175 | SAMN04488072_1177 | Protein arginine kinase; Catalyzes the specific phosphorylation of arginine residues in a large number of proteins. Is part of the bacterial stress response system. Protein arginine phosphorylation has a physiologically important role and is involved in the regulation of many critical cellular processes, such as protein homeostasis, motility, competence, and stringent and stress responses, by regulating gene expression and protein activity. | DNA repair protein RadA/Sms; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. | 0.678 |
| radA | SFB33667.1 | SAMN04488072_1177 | SAMN04488072_1173 | DNA repair protein RadA/Sms; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. | Transcriptional regulator CtsR; Belongs to the CtsR family. | 0.541 |
| radA | SFB33682.1 | SAMN04488072_1177 | SAMN04488072_1174 | DNA repair protein RadA/Sms; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. | Protein-arginine kinase activator protein McsA. | 0.616 |
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